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Current tasks:

Search algorithms:

  • KMP
  • Suffix arrays (Victor)
  • K-mers (Andrew)
  • Compressed Suffix arrays (Victor)

Annotations are used to get more precised location: (Kate) in progress

  • search in genes
  • protein id
  • repeats
  • locuses


  • Use issue tracker!
  • on the fly syntax check (question) client side with better error recovery (question)
  • task estimation time based on algorythm used
  • better instant input validation
  • ability to stop long running tasks
  • think about result layout
  • improve help layout: see current right side help
  • show sample queries on startup page(question)
  • HISTORY of queries
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